Reference

EBD Objects

auk_ebd()

Reference to eBird data file

auk_sampling()

Reference to eBird sampling event file

Process Text Files

auk_clean()

Clean an eBird data file (Deprecated)

auk_select()

Select a subset of columns

auk_split()

Split an eBird data file by species

Filter

auk_bbox()

Filter the eBird data by spatial bounding box

auk_bcr()

Filter the eBird data by Bird Conservation Region

auk_breeding()

Filter to only include observations with breeding codes

auk_complete()

Filter out incomplete checklists from the eBird data

auk_country()

Filter the eBird data by country

auk_county()

Filter the eBird data by county

auk_date()

Filter the eBird data by date

auk_distance()

Filter eBird data by distance travelled

auk_duration()

Filter the eBird data by duration

auk_exotic()

Filter the eBird data by exotic code

auk_extent()

Filter the eBird data by spatial extent

auk_filter()

Filter the eBird file using AWK

auk_last_edited()

Filter the eBird data by last edited date

auk_observer()

Filter the eBird data by observer

auk_project()

Filter the eBird data by project code

auk_protocol()

Filter the eBird data by protocol

auk_species()

Filter the eBird data by species

auk_state()

Filter the eBird data by state

auk_time()

Filter the eBird data by checklist start time

auk_year()

Filter the eBird data to a set of years

Pre-process

auk_rollup()

Roll up eBird taxonomy to species

auk_unique()

Remove duplicate group checklists

Import

auk_zerofill() collapse_zerofill()

Read and zero-fill an eBird data file

read_ebd() read_sampling()

Read an EBD file

Modeling

filter_repeat_visits()

Filter observations to repeat visits for hierarchical modeling

format_unmarked_occu()

Format EBD data for occupancy modeling with unmarked

Data

bcr_codes

BCR Codes

ebird_states

eBird States

ebird_taxonomy

eBird Taxonomy

valid_protocols

Valid Protocols

Path Management

auk_get_awk_path()

OS specific path to AWK executable

auk_get_ebd_path()

Return EBD data path

auk_set_awk_path()

Set a custom path to AWK executable

auk_set_ebd_path()

Set the path to EBD text files

Helpers

auk_ebd_version()

Get the EBD version and associated taxonomy version

auk_version()

Versions of auk, the EBD, and the eBird taxonomy

ebird_species()

Lookup species in eBird taxonomy

get_ebird_taxonomy()

Get eBird taxonomy via the eBird API

process_barcharts()

Process eBird bar chart data